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the largest group that we have is ~200 users. Have you tried adding a --timeout xxx value and --password yyy value to your tabcmd syncgroup command? It's worth a shot.
No, it has not been resolved. I've been sending logs to Tableau Support and working with them. In the short term I had to turn off any of my automatic synchronizations and manually repopulate the groups (remember, this erroneous sync process is now deleting any users from the group over 5K). I did this repopulate with tabcmd "adduser", using a csv. If you are savvy enough, you could create the csv by querying your AD. I, instead, restored a backup to my DEV machine (one that had the groups populated as they should be), used Tableau to create a user/group listing while attached to the master database, and then exported that list to the csv.
had same issue in 10.0
group had 1800 users, only 345 was imported, the rest was removed from group.
resynced and it was successfu.