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I totally understand what you'd like to do--unfortunately, in order to use filter actions with workbooks on a Tableau Server site, the "Show Sheets as Tabs" option must be selected. I do not know of any upcoming changes to this, unfortunately. I agree it would be best to let the publisher choose which tabs to show, and allow the use of filter actions to create navigation instead of using the tabs.
Thanks Matthew, really appreciate the quick reply.
Unfortunate that it's not feasible, seems like such a restriction to not allow different analytical paths to be followed intuitively.
We're using JS integration at the moment, but I'll have to see if there's flexibility to facilitate such a change.